Volume 29 By Chapter

Volume 29 of the Advances in Photosynthesis and Respiration Series: Laisk A, Nedbal L, and Govindjee (Eds.) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, 2009

Chapter 1: Hucka M and Schaff J (2009) Trends and tools for modeling in modern biology. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 3-15

Chapter 2: Nedbal L, Cervený J, Schmidt H (2009) Scaling and integration of kinetic models of photosynthesis: towards comprehensive e-photosynthesis. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 17-29

Chapter 3: Grondelle R, Novoderezhkin V, and Dekker JP (2009) Modeling light harvesting and primary charge seperation in photosystem I and photosystem II. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 33-53

Chapter 4: Freiberg A and Trinkunas G (2009) Unraveling the hidden nature of antenna excitations. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 55-82

Chapter 5: Lazár D and Schansker G (2009) Models of chlorophyll a fluorescence transients. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 85-123

Chapter 6: Vredenberg W and Prášil O (2009) Modeling of chlorophyll a fluorescence kinetics in plant cells: derivation of a descriptive algorithm. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 125-149

Chapter 7: Rubin A and Riznichenko G (2009) Modeling of the primary processes in a photosynthetic membrane. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 151-176

Chapter 8: Lavergne J (2009) Clustering of electron transfer components: kinetic and thermodynamic consequences. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 177-205

Chapter 9: Caemmerer S, Farquhar G and Berry J (2009) Biochemical model of C3 photosynthesis. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 209-230

Chapter 10: Bernacchi CJ, Rosenthal DM, Pimentel C, Long SP and Farquhar GD (2009) Modeling the temperature dependence of C3 photosynthesis. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 231-246

Chapter 11: Yin X, Harbinson J and Struik PC (2009) A model of the generalized stoichiometry of electron transport limited C3 photosynthesis: development and applications. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 247-273

Chapter 12: Farazdaghi H (2009) Modeling the kinetics of activation and reaction of rubisco from gas exchange. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 275-294

Chapter 13: Laisk A, Eicheimann H, and Oja V (2009) Leaf C3 photosynethsis in silico: integrated carbon/nitrogen metabolism. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 295-322

Chapter 14: Laisk A and Edwards G (2009) Leaf c4 photosynthesis in silico: the CO2 concentrating mechanism. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 323-348

Chapter 15: Woodrow IE (2009) Flux control analysis of the rate of photosynthetic CO2 assimilation. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 349-360

Chapter 16: Niinemets U and Anten N (2009) Packing the photosynthetic machinery: from leaf to canopy. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 363-399

Chapter 17: Zhu X and Long SP (2009) Can increase in rubisco specificity increase carbon gain by whole canopy? a modeling analysis. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 401-416

Chapter 18: Küppers M and Pfiz M (2009) Role of photosynthetic induction for daily and annual carbon gains of leaves and plan canopies. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 417-440

Chapter 19: Pietsch SA and Hasenauer H (2009) Photosynthesis within large-scale ecosystem models. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 441-464

Chapter 20: Friend AD, Geider RJ, Behrenfeld MJ, and Still CJ (2009) Photosynthesis in global-scale models. In: Laisk A, Nedbal L, and Govindjee (eds) Photosynthesis in silico: Understanding Complexity from Molecules to Ecosystems, volume 29. Springer, Dordrecht, pp 465-497